PHATRDRAFT_42364 lsm3u6 small nuclear rna associated (LSm3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42364 chr_28 lsm3u6 small nuclear rna associated (LSm3) 150212 150629 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0254

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LSm3 Like-Sm protein 3; The eukaryotic LSm proteins (LSm2-8 or LSm1-7) assemble into a hetero-heptameric... cl00259 150.069 2.39E-48 3 - 84 specific 212477
Sm_like superfamily Sm and related proteins; The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form... - 150.069 2.39E-48 3 - 84 superfamily 260307

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37962 Not available 267705 204785 432584 Cre16.g662300.t1.2 AT1G76860.1 285678

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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