PHATRDRAFT_31160 member ras oncogene family (Rab11_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31160	chr_29	member ras oncogene family (Rab11_like)	230041	230685	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0195

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0091	0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rab11_like		Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25; Rab11a, Rab11b, and Rab25 are...	cl17170	366.885	2.90E-130	10 - 174	specific	206660
Ras_like_GTPase superfamily		Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase...	-	366.885	2.90E-130	10 - 174	superfamily	266525
PLN03110		Rab GTPase; Provisional	-	336.13	2.34E-117	1 - 212	multi-dom	178657

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23528		Not available	174052	186644	426579	Cre03.g189250.t1.2	AT1G09630.1	513156

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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