PHATRDRAFT_43877 (ANK)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43877 chr_3 (ANK) 292601 294772 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0333

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0016
 0.47

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 58.9342 2.21E-10 620 - 719 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 58.9342 2.21E-10 620 - 719 superfamily 238125
PDZ Domain present in PSD-95, Dlg, and ZO-1/2; Also called DHR (Dlg homologous region) or GLGF (... cl00117 36.9732 0.00225814 119 - 158 specific 214570
PDZ superfamily PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif).... - 36.9732 0.00225814 119 - 158 superfamily 260201
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 43.008 2.17E-05 621 - 675 multi-dom 257947

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21265 Not available 250656 288585 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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