PHATRDRAFT_10199 tata-box binding protein (tata-box factor) (tata binding factor) (tata sequence-binding protein) (transcription initiation factor tfiid tbp subunit) (PLN00062)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10199	chr_3	tata-box binding protein (tata-box factor) (tata binding factor) (tata sequence-binding protein) (...	310168	310936	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0373

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TBP_eukaryotes		eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are...	cl08263	274.482	4.81E-94	3 - 175	specific	239952
TBP_TLF superfamily		TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors...	-	274.482	4.81E-94	3 - 175	superfamily	263554
PLN00062		TATA-box-binding protein; Provisional	-	319.719	1.16E-111	1 - 180	multi-dom	177693

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264095		Not available	143154	655	219064	Cre12.g505700.t1.2	AT1G55520.2	345098

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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