PHATRDRAFT_10247 cg17119-isoform a (2A43)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_10247 chr_3 cg17119-isoform a (2A43) 316806 317561 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0373

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0183
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PQ-loop PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... cl17546 51.7735 2.05E-09 158 - 212 specific 252442
PQ-loop superfamily PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... - 51.7735 2.05E-09 158 - 212 superfamily 266743
PQ-loop PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... cl17546 51.7735 2.05E-09 158 - 212 specific 252442
PQ-loop superfamily PQ loop repeat; Members of this family are all membrane bound proteins possessing a pair of repeats... - 51.7735 2.05E-09 158 - 212 superfamily 266743
2A43 Lysosomal Cystine Transporter; [Transport and binding proteins, Amino acids, peptides and amines]. - 129.205 3.19E-36 15 - 250 multi-dom 130026

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36686 Not available 204328 253294 73015 Not available AT5G40670.1 521733

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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