PHATRDRAFT_1875 calcium-dependent calmodulin-independent protein kinase cdpk (S_TKc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1875 chr_3 calcium-dependent calmodulin-independent protein kinase cdpk (S_TKc) 412189 413247 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0017
 0.46

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 190.017 7.42E-58 20 - 278 superfamily 263920
EF-hand_6 EF-hand domain; EF-hand domain. cl17302 33.7233 0.00825782 328 - 353 specific 257730
EF-hand_8 superfamily EF-hand domain pair; EF-hand domain pair. - 33.7233 0.00825782 328 - 353 superfamily 266615
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 255.918 2.66E-83 20 - 278 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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