PHATRDRAFT_25666 periodic tryptophan protein 2 (WD40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_25666 chr_3 periodic tryptophan protein 2 (WD40) 466942 469886 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0154
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 38.8552 0.00353843 34 - 187 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 38.8552 0.00353843 34 - 187 superfamily 238121
Utp12 superfamily Dip2/Utp12 Family; This domain is found at the C-terminus of proteins containing WD40 repeats.... - 90.7292 2.85E-21 759 - 864 superfamily 252308
Utp12 superfamily Dip2/Utp12 Family; This domain is found at the C-terminus of proteins containing WD40 repeats.... - 90.7292 2.85E-21 759 - 864 superfamily 252308
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 38.8552 0.00353843 34 - 187 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 38.8552 0.00353843 34 - 187 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 126.357 6.77E-31 154 - 573 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268331 Not available 213569 204669 467193 Cre06.g254150.t1.2 AT1G15440.2 325739

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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