PHATRDRAFT_43972 coenzyme f420 hydrogenase family beta subunit family (FrhB_FdhB_C)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43972	chr_3	coenzyme f420 hydrogenase family beta subunit family (FrhB_FdhB_C)	579116	580726	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0103

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0074	0.46	77000 83000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FrhB_FdhB_C superfamily		Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; Coenzyme F420 hydrogenase (EC:1....	-	115.02	5.41E-30	264 - 423	superfamily	252593
FrhB_FdhB_C superfamily		Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; Coenzyme F420 hydrogenase (EC:1....	-	115.02	5.41E-30	264 - 423	superfamily	252593
FrhB_FdhB_N superfamily		Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase (EC:1.12.99...	-	71.8033	2.55E-15	190 - 257	superfamily	252587
FrhB_FdhB_N superfamily		Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase (EC:1.12.99...	-	71.8033	2.55E-15	190 - 257	superfamily	252587

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
14482		Not available	276035	299024	98617	Cre11.g468700.t1.2	AT1G04620.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments