PHATRDRAFT_44011 disease resistance proteinPhaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44011	chr_3	disease resistance protein	690269	692968	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0233

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0118	0.28	140 210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	40.4166	0.00127193	594 - 787	superfamily	238064
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	42.9101	2.81E-05	615 - 689	multi-dom	258126
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	42.9101	2.81E-05	615 - 689	multi-dom	258126
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	42.9101	2.81E-05	615 - 689	multi-dom	258126

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268931		Not available	264302	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments