PHATRDRAFT_44037 (Pep3_Vps18 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44037	chr_3	(Pep3_Vps18 superfamily)	763476	767507	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0061

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pep3_Vps18 superfamily		Pep3/Vps18/deep orange family; This region is found in a number of protein identified as involved...	-	54.5468	1.64E-08	453 - 654	superfamily	253029

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262501		Not available	228366	257953	Not available	Cre07.g328550.t1.1	AT1G12470.1	561378

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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