PHATRDRAFT_33493 threonyl-trna synthetase (thrS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33493 chr_3 threonyl-trna synthetase (thrS) 1065809 1067937 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0493

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0025
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is... cl00268 509.399 4.86E-177 271 - 569 specific 238394
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 509.399 4.86E-177 271 - 569 superfamily 260313
ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS... cl00266 109.516 2.34E-28 569 - 659 specific 238437
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 109.516 2.34E-28 569 - 659 superfamily 260312
tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active form of... cl08469 65.4814 2.51E-13 195 - 246 specific 197931
tRNA_SAD superfamily Threonyl and Alanyl tRNA synthetase second additional domain; The catalytically active from of... - 65.4814 2.51E-13 195 - 246 superfamily 263673
thrS threonyl-tRNA synthetase; Reviewed - 973.103 0 77 - 659 multi-dom 237050

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40034 Not available 204616 206033 448666 Cre10.g421600.t1.2 AT2G04842.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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