PHATRDRAFT_33523 plastid ribosomal protein l21 large ribosomal subunit (rplU)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_33523	chr_3	plastid ribosomal protein l21 large ribosomal subunit (rplU)	1137285	1137995	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0230	0.25	25000 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rplU		50S ribosomal protein L21; Validated	cl00382	88.621	1.82E-22	110 - 213	specific	235510
Ribosomal_L21p superfamily		Ribosomal prokaryotic L21 protein; Ribosomal prokaryotic L21 protein.	-	88.621	1.82E-22	110 - 213	superfamily	241828

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9756		Not available	193953	234654	199412	Cre09.g388550.t1.2	Not available	344419

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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