PHATRDRAFT_33535 abcperiplasmic binding component (Phosphonate-bd superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_33535	chr_3	abcperiplasmic binding component (Phosphonate-bd superfamily)	1171026	1172099	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0325

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0013	0.38	0.0000016 5200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Phosphonate-bd superfamily		ABC transporter, phosphonate, periplasmic substrate-binding protein; This is a family of...	-	171.99	2.75E-51	56 - 274	superfamily	267484
TauA		ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion...	-	87.185	8.98E-20	39 - 346	multi-dom	223787

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6708		Not available	230043	318043	233314	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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