PHATRDRAFT_41807 serinelong chain base subunit 1 (PLN03227)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41807	chr_3	serinelong chain base subunit 1 (PLN03227)	1173295	1174518	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0364

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0056	0.30	3100 58000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN03227		serine palmitoyltransferase-like protein; Provisional	cl18945	682.401	0	15 - 406	specific	178766
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	682.401	0	15 - 406	superfamily	267298
bioF		8-amino-7-oxononanoate synthase; 7-keto-8-aminopelargonic acid synthetase is an alternate name....	-	215.211	1.66E-65	10 - 390	multi-dom	129937

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38576		Not available	197039	283728	Not available	Cre03.g146507.t1.1	AT4G36480.2	350782

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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