PHATRDRAFT_51630 calcitonin gene-related peptide-receptor component protein (RNA_pol_Rpb4)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51630	chr_3	calcitonin gene-related peptide-receptor component protein (RNA_pol_Rpb4)	1188838	1189410	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0181	0.26	21000 32000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNA_pol_Rpb4		RNA polymerase Rpb4; This family includes the Rpb4 protein. This family also includes C17 (aka CGRP...	cl00638	59.8975	2.18E-12	8 - 148	specific	252220
RNA_pol_Rpb4 superfamily		RNA polymerase Rpb4; This family includes the Rpb4 protein. This family also includes C17 (aka CGRP...	-	59.8975	2.18E-12	8 - 148	superfamily	260546

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3718		Not available	250497	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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