PHATRDRAFT_18793 tnf receptor-associated protein (PRK05218)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_18793	chr_3	tnf receptor-associated protein (PRK05218)	1331314	1333566	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0173

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0024	0.42	0.018 2.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HATPase_c		Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:...	cl00075	50.723	1.03E-07	117 - 236	specific	238030
HATPase_c superfamily		Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:...	-	50.723	1.03E-07	117 - 236	superfamily	260175
HSP90 superfamily		Hsp90 protein; Hsp90 protein.	-	279.346	2.12E-84	280 - 720	superfamily	249661
PRK05218		heat shock protein 90; Provisional	-	694.164	0	89 - 721	multi-dom	235366

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39149		Not available	197575	251099	448346	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments