PHATRDRAFT_10282 dead h (asp-glu-ala-asp his) box polypeptide 11 (chl1-like helicasecerevisiae) (DEAD_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_10282 chr_3 dead h (asp-glu-ala-asp his) box polypeptide 11 (chl1-like helicasecerevisiae) (DEAD_2) 1390803 1392725 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0042

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0026
 0.46

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEAD_2 superfamily DEAD_2; This represents a conserved region within a number of RAD3-like DNA-binding helicases that... - 175.617 2.63E-51 6 - 168 superfamily 253883
DEAD_2 superfamily DEAD_2; This represents a conserved region within a number of RAD3-like DNA-binding helicases that... - 175.617 2.63E-51 6 - 168 superfamily 253883
Helicase_C_2 Helicase C-terminal domain; This domain is the second of two tandem AAA domains found in a wide... cl17460 171.995 4.44E-50 433 - 606 specific 257644
Helicase_C_2 superfamily Helicase C-terminal domain; This domain is the second of two tandem AAA domains found in a wide... - 171.995 4.44E-50 433 - 606 superfamily 266701

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261639 Not available 200746 153149 417368 Cre07.g322300.t1.1 AT1G79890.1 470654

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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