PHATRDRAFT_41508 cobalamin synthesis protein p47k family protein (COG0523)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41508 chr_31 cobalamin synthesis protein p47k family protein (COG0523) 44140 45324 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0056

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0092
 0.51

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 248.325 3.67E-81 11 - 172 superfamily 266552
CobW_C Cobalamin synthesis protein cobW C-terminal domain; This is a large and diverse family of putative... cl08458 91.9144 4.51E-23 239 - 333 specific 254355
CobW_C superfamily Cobalamin synthesis protein cobW C-terminal domain; This is a large and diverse family of putative... - 91.9144 4.51E-23 239 - 333 superfamily 263667
COG0523 Putative GTPases (G3E family) [General function prediction only] - 338.886 4.53E-114 10 - 333 multi-dom 223597

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
3054 Not available 224667 221798 419514 Cre14.g630871.t1.1 AT1G15730.1 248037

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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