PHATRDRAFT_42398 malate dehydrogenase (PLN00106)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42398	chr_31	malate dehydrogenase (PLN00106)	103612	104779	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0113

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0077	0.23	31000 43000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MDH_glyoxysomal_mitochondrial		Glyoxysomal and mitochondrial malate dehydrogenases; MDH is one of the key enzymes in the citric...	cl17195	527.443	0	7 - 322	specific	133422
LDH_MDH_like superfamily		NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family; Members of...	-	527.443	0	7 - 322	superfamily	266546
PLN00106		malate dehydrogenase	-	545.702	0	2 - 317	multi-dom	215058

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20726		Not available	185757	179958	451022	Cre12.g483950.t1.2	AT3G15020.1	286325

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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