PHATRDRAFT_17115 trna-dihydrouridine synthase (DUS_like_FMN)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17115	chr_32	trna-dihydrouridine synthase (DUS_like_FMN)	75043	75690	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0393

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0162	0.30	0.00000051 3200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUS_like_FMN		Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the...	cl17186	154.189	4.42E-46	1 - 216	specific	239200
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	154.189	4.42E-46	1 - 216	superfamily	266538

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2552		Not available	204987	324602	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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