PHATRDRAFT_50615 (Sec7)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50615 chr_32 (Sec7) 91738 97321 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0132

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0035
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec7 Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... cl00136 205.534 1.17E-59 788 - 981 specific 238100
Sec7 superfamily Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central... - 205.534 1.17E-59 788 - 981 superfamily 260210
Sec7_N superfamily Guanine nucleotide exchange factor in Golgi transport N-terminal; The full-length Sec7 functions... - 139.271 6.96E-37 497 - 639 superfamily 257293
Sec7_N superfamily Guanine nucleotide exchange factor in Golgi transport N-terminal; The full-length Sec7 functions... - 139.271 6.96E-37 497 - 639 superfamily 257293

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262359 Not available 206929 262522 Not available Not available AT1G13980.2 528113

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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