PHATRDRAFT_54219 mgc85493 protein (PLN02528)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54219 chr_4 mgc85493 protein (PLN02528) 136690 138473 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0310

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0233
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-... cl11404 94.0083 2.04E-23 112 - 185 specific 133458
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 94.0083 2.04E-23 112 - 185 superfamily 264355
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 223.197 3.48E-69 292 - 522 superfamily 249671
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 223.197 3.48E-69 292 - 522 superfamily 249671
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 62.4413 1.80E-12 207 - 244 superfamily 251550
E3_binding superfamily e3 binding domain; This family represents a small domain of the E2 subunit of 2-oxo-acid... - 62.4413 1.80E-12 207 - 244 superfamily 251550
PLN02528 2-oxoisovalerate dehydrogenase E2 component - 624.436 0 114 - 525 multi-dom 215289

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36291 Not available 178096 298130 426762 Cre04.g228350.t1.1 AT3G06850.2 334040

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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