PHATRDRAFT_44390 (SnoaL_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44390 chr_4 (SnoaL_2) 405785 407668 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0035
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SnoaL_2 SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold. cl09109 45.3347 4.00E-06 83 - 184 specific 257217
NTF2_like superfamily Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family... - 45.3347 4.00E-06 83 - 184 superfamily 263720
SnoaL_2 SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold. cl09109 45.3347 4.00E-06 83 - 184 specific 257217
NTF2_like superfamily Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family... - 45.3347 4.00E-06 83 - 184 superfamily 263720

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271147 300016 73427 Cre02.g088500.t1.1 AT3G25805.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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