PHATRDRAFT_44438 (Abi)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44438	chr_4	(Abi)	547955	549331	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0229

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0189	0.30	6300 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Abi		CAAX protease self-immunity; Members of this family are probably proteases (after a isoprenyl group...	cl00558	69.1238	1.55E-14	360 - 447	specific	251346
Abi superfamily		CAAX protease self-immunity; Members of this family are probably proteases (after a isoprenyl group...	-	69.1238	1.55E-14	360 - 447	superfamily	260497

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1366		Not available	237350	254504	96857	Cre07.g348750.t1.1	AT5G60750.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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