PHATRDRAFT_10747 flavin reductase-related (SDR_a5)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10747	chr_4	flavin reductase-related (SDR_a5)	791530	792306	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0174

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0066	0.37	34000 260000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SDR_a5		atypical (a) SDRs, subgroup 5; This subgroup contains atypical SDRs, some of which are identified...	cl09931	148.923	4.71E-44	9 - 232	specific	187554
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	148.923	4.71E-44	9 - 232	superfamily	263925
Epimerase		NAD dependent epimerase/dehydratase family; This family of proteins utilize NAD as a cofactor. The...	-	48.4301	3.77E-07	10 - 242	multi-dom	250566

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38608		Not available	212595	180040	120739	Cre11.g467755.t1.1	AT2G34460.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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