PHATRDRAFT_41845 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (lytB_ispH)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41845	chr_4	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (lytB_ispH)	980823	982163	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0500

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0173	0.27	130 4100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
lytB_ispH		4-hydroxy-3-methylbut-2-enyl diphosphate reductase; The 4-hydroxy-3-methylbut-2-enyl diphosphate (...	cl19123	287.384	1.18E-94	48 - 384	specific	260116
lytB_ispH superfamily		4-hydroxy-3-methylbut-2-enyl diphosphate reductase; The 4-hydroxy-3-methylbut-2-enyl diphosphate (...	-	287.384	1.18E-94	48 - 384	superfamily	267476

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28326		Not available	175810	263558	112566	Cre08.g372950.t1.2	AT4G34350.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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