PHATRDRAFT_34061 (SEP)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34061 chr_4 (SEP) 999799 1000709 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0154

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SEP SEP domain; The SEP domain is named after Saccharomyces cerevisiae Shp1, Drosophila melanogaster... cl02662 83.3787 1.04E-20 72 - 141 specific 254603
SEP superfamily SEP domain; The SEP domain is named after Saccharomyces cerevisiae Shp1, Drosophila melanogaster... - 83.3787 1.04E-20 72 - 141 superfamily 261398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 65.0627 3.32E-14 172 - 243 superfamily 260222

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25024 Not available 207410 315225 429219 Cre01.g034451.t1.1 AT4G22150.1 318553

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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