PHATRDRAFT_44661 (PAP2_C)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44661	chr_4	(PAP2_C)	1196125	1197630	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0376

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0163	0.35	55000 64000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PAP2_C superfamily		PAP2 superfamily C-terminal; This family is closely related to the C-terminal a region of PAP2.	-	68.3574	2.23E-14	326 - 397	superfamily	258532
PAP2_C superfamily		PAP2 superfamily C-terminal; This family is closely related to the C-terminal a region of PAP2.	-	68.3574	2.23E-14	326 - 397	superfamily	258532

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10953		Not available	242631	300899	Not available	Cre01.g033050.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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