PHATRDRAFT_50825 ruvb2_ustma-like helicase 2 (TIP49)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50825	chr_4	ruvb2_ustma-like helicase 2 (TIP49)	1319459	1321151	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0237

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0035	0.39	230 940

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	40.9775	0.000100107	47 - 110	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	40.9775	0.000100107	47 - 110	superfamily	267297
TIP49		DNA helicase TIP49, TBP-interacting protein [Transcription]	-	580.078	0	14 - 434	multi-dom	224145

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
27451		Not available	273739	328402	256467	Cre10.g442700.t1.2	AT5G67630.1	490136

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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