PHATRDRAFT_54296 meiotic nuclear divisions 1 homolog (Mnd1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54296	chr_5	meiotic nuclear divisions 1 homolog (Mnd1)	169332	170073	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0109

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0057	0.32	13 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG5124 superfamily		Protein predicted to be involved in meiotic recombination [Cell division and chromosome...	-	106.192	3.96E-28	4 - 202	superfamily	227453
Mnd1		Mnd1 family; This family of proteins includes MND1 from S. cerevisiae. The mnd1 protein forms a...	-	139.683	3.63E-41	16 - 202	multi-dom	202833

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25513		Not available	273989	295346	416873	Cre06.g278850.t1.1	AT4G29170.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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