PHATRDRAFT_44766 sec14-like 1 (SEC14)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44766	chr_5	sec14-like 1 (SEC14)	179018	180468	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0340

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0245	0.30	97 620000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC14		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	cl15787	94.3742	5.47E-23	219 - 385	specific	238099
SEC14 superfamily		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	-	94.3742	5.47E-23	219 - 385	superfamily	265785

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1526		Not available	181440	245753	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments