PHATRDRAFT_44767 (COG1112)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44767	chr_5	(COG1112)	180748	185513	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0328

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0139	0.32	4.7 98

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA_12 superfamily		AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA...	-	92.6114	9.50E-21	993 - 1177	superfamily	257490
AAA_19 superfamily		Part of AAA domain; Part of AAA domain.	-	47.3288	2.11E-06	497 - 544	superfamily	257601
AAA_19 superfamily		Part of AAA domain; Part of AAA domain.	-	47.3288	2.11E-06	497 - 544	superfamily	257601
COG1112		Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and...	-	115.444	3.04E-26	899 - 1179	multi-dom	224037

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	275020	181028	461023	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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