PHATRDRAFT_11313 pentapeptide repeat (COG1357)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11313 chr_5 pentapeptide repeat (COG1357) 199391 199888 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0042

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pentapeptide superfamily Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The... - 31.5851 0.00584456 44 - 79 superfamily 109845
Pentapeptide superfamily Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The... - 31.5851 0.00584456 44 - 79 superfamily 109845
Pentapeptide superfamily Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The... - 31.5851 0.00584456 44 - 79 superfamily 109845
Pentapeptide superfamily Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The... - 31.5851 0.00584456 44 - 79 superfamily 109845
COG1357 Pentapeptide repeats containing protein [Function unknown] - 54.8812 2.09E-10 1 - 84 multi-dom 224276

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8044 Not available 187021 175549 194264 Cre16.g687300.t1.2 AT2G44920.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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