PHATRDRAFT_44838 mgc83623 protein (zf-C3HC4_3)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44838	chr_5	mgc83623 protein (zf-C3HC4_3)	392246	393466	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0365

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0082	0.37	3.1 500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-C3HC4_3		Zinc finger, C3HC4 type (RING finger); Zinc finger, C3HC4 type (RING finger).	cl17238	48.1535	1.35E-07	357 - 395	specific	258183
RING superfamily		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	-	48.1535	1.35E-07	357 - 395	superfamily	266579
FYVE superfamily		FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with...	-	38.9533	0.000199125	141 - 181	superfamily	266823

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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