PHATRDRAFT_11337 nucleic acid binding nabp (Pumilio)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11337	chr_5	nucleic acid binding nabp (Pumilio)	410724	411930	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0401

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0139	0.32	4.7 98

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pumilio superfamily		Pumilio-family RNA binding domain; Puf repeats (also labelled PUM-HD or Pumilio homology domain)...	-	326.856	1.72E-110	6 - 313	superfamily	153420
Pumilio superfamily		Pumilio-family RNA binding domain; Puf repeats (also labelled PUM-HD or Pumilio homology domain)...	-	326.856	1.72E-110	6 - 313	superfamily	153420

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32366		Not available	215511	178580	Not available	Cre17.g746647.t1.1	AT2G29190.2	504992

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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