PHATRDRAFT_11126 aspartyl glutamyl-trna(asn gln) amidotransferase subunit b (GatB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11126 chr_5 aspartyl glutamyl-trna(asn gln) amidotransferase subunit b (GatB) 823542 825146 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0152
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GatB_N superfamily GatB/GatE catalytic domain; This domain is found in the GatB and GatE proteins. - 365.228 2.77E-123 2 - 302 superfamily 251629
GatB_N superfamily GatB/GatE catalytic domain; This domain is found in the GatB and GatE proteins. - 365.228 2.77E-123 2 - 302 superfamily 251629
GatB_Yqey GatB domain; This domain is found in GatB and proteins related to bacterial Yqey. It is about 140... cl17694 114.138 6.04E-30 358 - 504 specific 197913
GatB_Yqey superfamily GatB domain; This domain is found in GatB. It is about 140 amino acid residues long. This domain is... - 114.138 6.04E-30 358 - 504 superfamily 266776
GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal... - 504.028 1.12E-174 1 - 505 multi-dom 223142

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262625 Not available 147678 175442 Not available Not available AT1G48520.1 482876

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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