PHATRDRAFT_11462 ac068562_11est gbPhaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11462	chr_5	ac068562_11est gb	868425	868916	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0058

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0049	0.33	0.0039 80

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trm112p		Trm112p-like protein; The function of this family is uncertain. The bacterial members are about 60-...	cl01066	36.9009	7.74E-05	90 - 119	specific	252283
Trm112p superfamily		Trm112p-like protein; The function of this family is uncertain. The bacterial members are about 60-...	-	36.9009	7.74E-05	90 - 119	superfamily	260771

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36539		Not available	180420	319685	Not available	Cre12.g512550.t1.2	AT1G78190.1	553490

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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