PHATRDRAFT_34582 diaminopimelate epimerase (PLN02536)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34582 chr_5 diaminopimelate epimerase (PLN02536) 961897 962901 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0123
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DAP_epimerase Diaminopimelate epimerase; Diaminopimelate epimerase contains two domains of the same alpha/beta... cl19724 126.241 1.95E-35 46 - 172 specific 250792
DAP_epimerase superfamily Diaminopimelate epimerase; Diaminopimelate epimerase contains two domains of the same alpha/beta... - 126.241 1.95E-35 46 - 172 superfamily 268077
DAP_epimerase Diaminopimelate epimerase; Diaminopimelate epimerase contains two domains of the same alpha/beta... cl19724 126.241 1.95E-35 46 - 172 specific 250792
DAP_epimerase superfamily Diaminopimelate epimerase; Diaminopimelate epimerase contains two domains of the same alpha/beta... - 126.241 1.95E-35 46 - 172 superfamily 268077
PLN02536 diaminopimelate epimerase - 457.309 1.95E-162 59 - 334 multi-dom 178151

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36614 Not available 267911 309300 212438 Cre05.g237400.t1.2 AT3G53580.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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