PHATRDRAFT_45032 (RCC1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45032 chr_5 (RCC1) 1059490 1063447 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0126

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843
RCC1_2 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 35.9265 0.00760393 552 - 574 superfamily 257859
RCC1_2 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 35.9265 0.00760393 552 - 574 superfamily 257859
ZnF_U1 superfamily U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear... - 38.7727 0.00102014 980 - 1009 superfamily 197732
ZnF_U1 superfamily U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear... - 38.7727 0.00102014 980 - 1009 superfamily 197732
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 38.2768 0.00126319 627 - 674 superfamily 249843

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22727 Not available 151572 165220 Not available Not available Not available 498697

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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