PHATRDRAFT_11673 band 7 family protein (SPFH_like_u4)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11673	chr_6	band 7 family protein (SPFH_like_u4)	89925	90803	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0350

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0222	0.32	0.000016 12000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SPFH_like_u4		Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model...	cl19107	397.341	2.22E-139	17 - 281	specific	259805
SPFH_like superfamily		core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model...	-	397.341	2.22E-139	17 - 281	superfamily	267460
PHB		prohibitin homologues; prohibitin homologues	-	84.6344	3.33E-20	13 - 172	multi-dom	214581

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40630		Not available	205091	261376	Not available	Cre16.g690879.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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