PHATRDRAFT_45072 helicase-like transcription factor hltf dna helicasedead-box superfamily (Dcm)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45072	chr_6	helicase-like transcription factor hltf dna helicasedead-box superfamily (Dcm)	117390	120740	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0199

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0091	0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Dcm		Site-specific DNA methylase [DNA replication, recombination, and repair]	cl19095	82.8646	2.97E-17	410 - 637	specific	223348
Cyt_C5_DNA_methylase superfamily		Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many...	-	82.8646	2.97E-17	410 - 637	superfamily	267448

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3158		Not available	205902	192957	236798	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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