PHATRDRAFT_26780 cdk5 regulatory subunit associated protein 1 (PRK14329)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_26780 chr_6 cdk5 regulatory subunit associated protein 1 (PRK14329) 367114 368661 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0487

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Elp3 Elongator protein 3, MiaB family, Radical SAM; This superfamily contains MoaA, NifB, PqqE,... cl18962 143.696 9.73E-40 156 - 397 specific 214792
DRE_TIM_metallolyase superfamily DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate... - 143.696 9.73E-40 156 - 397 superfamily 267315
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 132.625 3.82E-37 5 - 101 superfamily 250224
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 132.625 3.82E-37 5 - 101 superfamily 250224
PRK14329 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional - 545.802 0 5 - 516 multi-dom 237676

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263872 Not available 198780 199737 416037 Not available AT4G36390.1 536500

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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