PHATRDRAFT_19708 sjchgc09380 protein (PLN00133)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19708 chr_6 sjchgc09380 protein (PLN00133) 558906 560692 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0106

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0225
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fumerase Fumarate hydratase (Fumerase); This family consists of several bacterial fumarate hydratase... cl00851 344.043 1.88E-114 73 - 354 specific 253319
Fumerase superfamily Fumarate hydratase (Fumerase); This family consists of several bacterial fumarate hydratase... - 344.043 1.88E-114 73 - 354 superfamily 260660
Fumerase_C Fumarase C-terminus; This family consists of the C terminal region of several bacterial fumarate... cl00795 299.434 3.13E-98 358 - 565 specific 253320
Fumerase_C superfamily Fumarase C-terminus; This family consists of the C terminal region of several bacterial fumarate... - 299.434 3.13E-98 358 - 565 superfamily 260626
PLN00133 class I-fumerate hydratase; Provisional - 1155.4 0 1 - 567 multi-dom 215068

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22464 Not available 210498 300333 438455 Cre06.g254400.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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