PHATRDRAFT_54375 mu1 adaptin (AP-1_Mu1_Cterm)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54375	chr_6	mu1 adaptin (AP-1_Mu1_Cterm)	653168	654665	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0133	0.27	7.9 370

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AP-1_Mu1_Cterm		C-terminal domain of medium Mu1 subunit in clathrin-associated adaptor protein (AP) complex AP-1;...	cl10970	524.861	0	157 - 433	specific	211361
AP_MHD_Cterm superfamily		C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); This...	-	524.861	0	157 - 433	superfamily	264154
Clat_adaptor_s superfamily		Clathrin adaptor complex small chain; Clathrin adaptor complex small chain.	-	43.5008	1.44E-05	5 - 124	superfamily	261170

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37264		Not available	205088	222062	434096	Cre06.g262250.t1.2	AT1G60780.1	349597

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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