PHATRDRAFT_45335 (EFh)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45335 chr_6 (EFh) 873446 874618 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0156

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0100
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 63.3357 7.37E-13 94 - 152 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 63.3357 7.37E-13 94 - 152 superfamily 238008
BCD superfamily Beta-carotene 15,15'-dioxygenase; BCD is a family of bacterial and archaeal proteins is... - 39.1688 0.00105517 238 - 330 superfamily 265421
NTR2 superfamily Nineteen complex-related protein 2; NTR2 or Nineteen complex-related protein 2 is a family of... - 38.9003 0.00111369 61 - 222 superfamily 259589
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 47.7637 2.14E-07 99 - 153 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1909 Not available 228315 148137 257034 Cre01.g039150.t1.2 AT5G55710.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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