PHATRDRAFT_45345 pentatricopeptiderepeat-containing protein
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45345	chr_6	pentatricopeptiderepeat-containing protein	909410	911159	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0001

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0016	0.47	1 18000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PPR_2		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	cl03252	45.4714	2.12E-06	194 - 241	specific	257477
PPR_2 superfamily		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	-	36.997	0.00163378	229 - 256	superfamily	261658
PPR_2 superfamily		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	-	36.997	0.00163378	229 - 256	superfamily	261658
PPR_2 superfamily		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	-	36.997	0.00163378	229 - 256	superfamily	261658

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	177738	306490	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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