PHATRDRAFT_45350 (SbcC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45350 chr_6 (SbcC) 922004 926117 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0131

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0146
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... cl17201 50.3211 3.66E-07 1226 - 1317 specific 213179
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 54.8554 1.63E-08 627 - 851 superfamily 266551
MPP_superfamily superfamily metallophosphatase superfamily, metallophosphatase domain; Metallophosphatases (MPPs), also known... - 58.5305 1.17E-09 240 - 430 superfamily 265413
AAA_23 AAA domain; AAA domain. cl17201 54.8554 1.63E-08 627 - 851 specific 257800
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 54.8554 1.63E-08 627 - 851 superfamily 266551
SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] - 99.4494 2.37E-21 625 - 1329 multi-dom 223496

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264064 Not available 179585 321292 110346 Cre13.g602950.t2.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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