PHATRDRAFT_45482 y2612_sacd2 upf0341 protein sde_2612 (SAM_MT superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45482	chr_7	y2612_sacd2 upf0341 protein sde_2612 (SAM_MT superfamily)	315898	316986	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0331

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	cl17173	40.4911	7.75E-05	184 - 279	specific	100107
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	40.4911	7.75E-05	184 - 279	superfamily	266528
SAM_MT superfamily		Putative SAM-dependent methyltransferase; This is a family of putative SAM-dependent...	-	139.461	8.97E-39	139 - 362	superfamily	248071

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4046		Not available	234893	24332	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments