PHATRDRAFT_45630 integral membrane protein (RhaT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45630	chr_7	integral membrane protein (RhaT)	769406	770560	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0225	0.20	12 6.8

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EamA		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	cl17759	44.9267	3.09E-06	16 - 138	specific	250209
EamA superfamily		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	-	44.9267	3.09E-06	16 - 138	superfamily	266818
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	56.7985	1.73E-09	8 - 297	multi-dom	223769

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32610		Not available	274221	181860	248545	Cre18.g748997.t1.1	AT5G19980.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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