PHATRDRAFT_45692 nuclear exosome component rrp6p (DnaQ_like_exo superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45692 chr_7 nuclear exosome component rrp6p (DnaQ_like_exo superfamily) 954184 956362 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0193

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0097
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 148.9 3.00E-41 231 - 403 superfamily 263941
R3H superfamily R3H domain. The name of the R3H domain comes from the characteristic spacing of the most conserved... - 42.339 3.27E-05 82 - 126 superfamily 260334
HRDC superfamily HRDC domain; The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid... - 37.5304 0.00128388 594 - 643 superfamily 261358

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2321 Not available 259762 185876 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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